Table 4 The three up-regulated exonic circRNAs and the expression of their parent genes in TCGA-LIHC and GSE14520-GPL3921
ID in circBase | Position | Strand | Genomic length | Spliced length | CircRNA regulation | Parent gene symbol | Parent gene regulation in TCGA-LIHC | Parent gene regulation in GSE14520 | CircRNA vs. parent gene regulation direction |
|---|---|---|---|---|---|---|---|---|---|
hsa_circ_0009910 | chr1:12,049,221–12,052,747 | + | 3526 | 315 | Up | MFN2 | Up | No significant | Different |
hsa_circ_0049783 | chr19:14,705,328–14,705,612 | + | 284 | 126 | Up | CLEC17A | No significant | Not available | Different |
hsa_circ_0089172 | chr9:134,049,441–134,053,797 | + | 4356 | 526 | Up | NUP214 | Up | No significant | Different |