Table 5 The target miRNAs of three circRNAs predicted by circBank and CSCD
circRNA | miRNA | miRanda binding position | MSA Start | MSA End | Site Type | Expressed in primary HCC or matched adjacent normal tissues according to GSE76903* |
|---|---|---|---|---|---|---|
hsa_circ_0009910 | hsa-miR-455-5p | 273 | 23 | 29 | 7mer-m8 | Yes |
hsa-miR-615-3p | 266 | 15 | 22 | 8mer-1a | Yes | |
hsa-miR-3926 | 296 | 43 | 49 | 7mer-m8 | No | |
hsa-miR-5197-3p | 1 | 65 | 71 | 7mer-m8 | No | |
hsa-miR-6836-3p | 270 | 20 | 26 | 7mer-m8 | No | |
hsa_circ_0049783 | hsa-miR-18a-3p | 12 | 78 | 84 | 7mer-m8 | Yes |
hsa-miR-8071 | 97 | 62 | 68 | 7mer-1a | No | |
hsa_circ_0089172 | hsa-miR-4524a-3p | 160 | 57 | 63 | 7mer-m8 | Yes |
hsa-miR-3154 | 494 | 33 | 40 | 8mer-1a | No | |
hsa-miR-3190-5p | 397 | 50 | 55 | 6mer | No |