Genes | Hazard ratio (95% CI)a | qRT-PCR (relative expression) | RNA-seq (FPKM) | ||||
---|---|---|---|---|---|---|---|
Controls | ME49-infected | RH-infected | Controls | ME49-infected | RH-infected | ||
Genes that are up regulated by T. gondii | |||||||
 IL6 | 0.79 (0.63, 0.99) | 1.01 | 18.88 | 5.58 | 90.33 | 138.15 | 217.73 |
 EGR1 | 0.59 (0.47, 0.74) | 1.05 | 162.30 | 66.92 | 1.64 | 10.19 | 40.00 |
 CDKN1A | 0.58 (0.46, 0.73) | 1.02 | 7.26 | 3.17 | 97.48 | 229.97 | 211.58 |
 JUNB | 0.73 (0.58, 0.91) | 1.13 | 13.63 | 9.39 | 24.83 | 47.98 | 58.85 |
 CCL3L1 | 0.72 (0.56, 0.93) | 1.06 | 123.60 | 114.80 | 29.99 | 73.42 | 140.15 |
 ID3 | 0.71 (0.56, 0.90) | 1.03 | 0.99 | 2.13 | 10.73 | 34.02 | 24.27 |
G enes that are down regulated by T. gondii | |||||||
 PRC1 | 1.71 (1.37, 2.14) | 1.02 | 0.24 | 0.84 | 83.91 | 48.207 | 54.31 |